Dodin Group

Publications

  1. Cohen, L.; Dodin, A.; Zeng, M.; Wilson, K.R.; Limmer, D.T.; Molecular Insight into How Alcohol Catalyzes the Interfacial Chlorination of Squalene J. Phys. Chem. B 2194–2202 (2026). [Link] [Preprint]
  2. Scott, M.; Chen, W.J.; Banal, J.; Brooks, C.; Wang, X.; Hart, S.; Dodin, A.; Bathe, M.; Willard, A.; Schlau-Cohen, G.; Transport of Delocalized Excitons through DNA-Based Molecular Photonic Wires ACS Nano 19 (44) 38509-38520 (2025). [Link]
  3. Cohen, L.; Dodin, A.; Wilson, K.R. ; Limmer, D.T.; Accelerated Chlorination at the Air-Organic Interface Revealed by Molecular Simulations and Kinetic Modeling J. Phys. Chem. Lett. 16 (29) 7498-7505 (2025). [Link] [Preprint]
  4. Dodin, A.†; NaCl Ion Pairing at Liquid-Insulator and Liquid-Conductor Interfaces. J. Phys. Chem. C 129 (20) 9572-9579 (2025). [Link] [Preprint]
  5. Heelweg, H.J.; Dodin, A.; Willard, A.P. ; Deriving the Landauer Principle From the Quantum Shannon Entropy. J. Phys. Chem. Lett. 16 (5) 1397-1402 (2025). [Link] [Preprint]
  6. Bernal, F.; Dodin, A.; Kyprianou, C.; Limmer, D.T.; Saykally, R.J. Adsorption of Guanidinium Cations to the Air-Water Interface. Proc. Natl. Acad. Sci. 122 (2) e2418443122 (2025). [Link] [Preprint]
  7. Dodin, A.†; Tscherbul, T.V.; Brumer, P. Population Oscillations and Ubiquitous Coherences in multilevel quantum systems driven by incoherent radiation J. Phys. Chem. Lett. 15 (30) 7694 (2024). [Link] [Preprint]
  8. Anderson, M.C.; Dodin, A.; Fay, T.P.; Limmer, D.T. Coherent control from quantum committment probabilities J. Chem. Phys. 024115 (2024). [Link] [Preprint]
  9. Dodin, A.; Deng, G.-H.; Rebstock, J.A.; Zhu, Q.; Limmer, D.T.; Baker, L.R. Sodium Carbonate ion complexes modify water structure at electrode interfaces Appl. Surf. Sci. 667 160345 (2024). [Link] [Preprint]
  10. Dodin, A.†; Geissler, P.L. Symmetrized Drude Oscillator Force Fields Improve Numerical Performance of Polarizable Molecular Dynamics. J. Chem. Theory Comput. 19 (10) 2906 (2023). [Link] [Preprint]
  11. Dodin, A.; Provazza, J.; Coker, D.F.; Willard, A.P. Trajectory Ensemble Methods Provide Single-Molecule Statistics for Quantum Dynamical Systems. J. Chem. Theory Comput. 18 (4) 2047 (2022). [Link]
  12. Dodin, A.†; Brumer, P.† Noise-induced coherence in molecular processes. J. Phys. B 54 (22) 223001 (2022). [Link] [Preprint]
  13. Dodin, A.; Willard, A.P. Nonequilibrium Work Relations and Response Theories in Ensemble Quantum Systems J. Phys. Chem. Lett. 12 (45) 1151 (2021). [Link]
  14. Dodin, A.†; Brumer, P.† Generalized adiabatic theorems: Quantum systems driven by modulated time-varying fields. Phys. Rev. X. Quant. 2 (3) 013295 (2021). [Link] [Preprint]
  15. Koyu, S.; Dodin, A.; Brumer, P.; Tscherbul, T.V. Steady-state Fano coherences in a V-type system driven by polarized incoherent light. Phys. Rev. Research 3, 013295 (2021). [Link] [Preprint]
  16. Hart, S.M.; Chen, W.J.; Banal, J.L.; Bricker, W.P.; Dodin, A.; Markova, Y.; Willard, A.P.; Haener, R.; Bathe, M.; Schlau-Cohen, G. Engineering couplings in excitonic chromophore systems using synthetic DNA scaffolds. Chem (2021). [Link]
  17. Castellanos, M.A.; Dodin, A.; Willard, A.P. On the design of molecular excitonic circuits for quantum computing: the universal quantum gates. Phys. Chem. Chem. Phys. 20, 3048 (2020). [Link]
  18. Dodin, A.; Aull, B.; Kunz, R.R.; Willard, A.P. Theoretical Bounds on Electron Energy Filtering in Disordered Nanomaterials. Nano Lett. 19 (12), 8441 (2019). [Link] [Preprint]
  19. Dodin, A.; Willard, A.P. State space distribution and dynamical flow for closed and open quantum systems. J. Chem. Phys. 151, 064106 (2019). [Link]
  20. Dodin, A.; Brumer, P. Light-induced processes in nature: Coherences in the establishment of the nonequilibrium steady state in model retinal isomerization. J. Chem. Phys. 150, 184304 (2019). [Link]
  21. Azzaro, M.S.; Dodin, A.; Zhang, D.Y.; Willard, A.P.; Roberts, S.T. Exciton-Delocalizing Ligands Can Speed Up Energy Migration in Nanocrystal Solids. Nano Lett. 18 (5), 3259 (2018). [Link]
  22. Dodin, A.; Tscherbul, T.V.; Alicki, R.; Vutha, A.; Brumer, P. Secular vs. Non-secular Redfield Dynamics and Fano Coherences in Incoherent Excitation: An Experimental Proposal (Editors’ Suggestion). Phys. Rev. A 97, 013421; (2018). [Link]
  23. Freyria, F.S.; Cordero, J.S.; Caram, J.R.; Doria, S.; Dodin, A.; Chen, Y.; Willard, A.P.; Bawendi, M.G. Near-Infrared Quantum Dot Emission Enhanced by Stabilized Self-Assembled J-Aggregate Antennas. Nano Lett. 17 (12), 7665 (2017). [Link]
  24. Dodin, A.; Brumer, P. Comment on ”Thermal-light-induced dynamics: Coherence and revivals in V-type and molecular Jaynes-Cummings systems.” Phys. Rev. A 95, 067801 (2017). [Link]
  25. Dodin, A.; Tscherbul, T.V.; Brumer, P. Coherent dynamics of V-type systems driven by time-dependent incoherent radiation. J. Chem. Phys. 145, 244313 (2016). [Link]
  26. Dodin, A.; Tscherbul, T.V.; Brumer, P. Quantum dynamics of incoherently driven V-type system: Analytic solutions beyond the secular approximation (Editors’ Choice). J. Chem. Phys. 140, 124709 (2016). [Link] [Preprint]
  27. Dodin, A.; Garmon, S.; Simine, L.; Segal, D. Landau-Zener transitions mediated by an environment: population transfer and energy dissipation. J. Chem. Phys. 144 244108 (2016). [Link] [Preprint]

† Indicates Corresponding Author